Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d4aQ9D7V1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sh2d4aQ9D7V1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4aQ9D7V1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4aQ9D7V1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d4aQ9D7V1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.21■□□□□ 0.67
Sh2d4aQ9D7V1 Cap2-205ENSMUST00000225824 1634 ntBASIC19.21■□□□□ 0.67
Sh2d4aQ9D7V1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d4aQ9D7V1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Gm13238-201ENSMUST00000117655 780 ntBASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d4aQ9D7V1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Gm43566-201ENSMUST00000196851 808 ntBASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d4aQ9D7V1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d4aQ9D7V1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4aQ9D7V1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4aQ9D7V1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.16■□□□□ 0.66
Sh2d4aQ9D7V1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4aQ9D7V1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4aQ9D7V1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d4aQ9D7V1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sh2d4aQ9D7V1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d4aQ9D7V1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh2d4aQ9D7V1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh2d4aQ9D7V1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Sh2d4aQ9D7V1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh2d4aQ9D7V1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Gm10399-202ENSMUST00000202768 748 ntBASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2d4aQ9D7V1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms