Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4aQ9D3I8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4aQ9D3I8 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rhox4aQ9D3I8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rhox4aQ9D3I8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rhox4aQ9D3I8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rhox4aQ9D3I8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rhox4aQ9D3I8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Rhox4aQ9D3I8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rhox4aQ9D3I8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rhox4aQ9D3I8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rhox4aQ9D3I8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rhox4aQ9D3I8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rhox4aQ9D3I8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rhox4aQ9D3I8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rhox4aQ9D3I8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rhox4aQ9D3I8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms