Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim42Q9D2H5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim42Q9D2H5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim42Q9D2H5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim42Q9D2H5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim42Q9D2H5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim42Q9D2H5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim42Q9D2H5 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim42Q9D2H5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Trim42Q9D2H5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Gm14523-201ENSMUST00000117260 558 ntBASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim42Q9D2H5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim42Q9D2H5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim42Q9D2H5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim42Q9D2H5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim42Q9D2H5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim42Q9D2H5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim42Q9D2H5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim42Q9D2H5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim42Q9D2H5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim42Q9D2H5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim42Q9D2H5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim42Q9D2H5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms