Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rita1Q9D1H0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.42■□□□□ 0.54
Rita1Q9D1H0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rita1Q9D1H0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.41■□□□□ 0.54
Rita1Q9D1H0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rita1Q9D1H0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rita1Q9D1H0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rita1Q9D1H0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rita1Q9D1H0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rita1Q9D1H0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Rita1Q9D1H0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rita1Q9D1H0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rita1Q9D1H0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rita1Q9D1H0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rita1Q9D1H0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rita1Q9D1H0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rita1Q9D1H0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.37■□□□□ 0.53
Rita1Q9D1H0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rita1Q9D1H0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rita1Q9D1H0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rita1Q9D1H0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Rita1Q9D1H0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rita1Q9D1H0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms