Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd1Q9D0E3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd1Q9D0E3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Lysmd1Q9D0E3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Lysmd1Q9D0E3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.8■■□□□ 1.08
Lysmd1Q9D0E3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.8■■□□□ 1.08
Lysmd1Q9D0E3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Lysmd1Q9D0E3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd1Q9D0E3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.78■■□□□ 1.08
Lysmd1Q9D0E3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lysmd1Q9D0E3 Gm13146-201ENSMUST00000118508 780 ntBASIC21.78■■□□□ 1.08
Lysmd1Q9D0E3 Gm25925-201ENSMUST00000158314 306 ntBASIC21.78■■□□□ 1.08
Lysmd1Q9D0E3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Lysmd1Q9D0E3 Gm26524-201ENSMUST00000192339 390 ntBASIC21.78■■□□□ 1.08
Lysmd1Q9D0E3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.78■■□□□ 1.08
Lysmd1Q9D0E3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd1Q9D0E3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.77■■□□□ 1.08
Lysmd1Q9D0E3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Lysmd1Q9D0E3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.77■■□□□ 1.08
Lysmd1Q9D0E3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd1Q9D0E3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Lysmd1Q9D0E3 Gm12896-201ENSMUST00000118430 226 ntBASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Rab3c-203ENSMUST00000224180 967 ntBASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd1Q9D0E3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Lysmd1Q9D0E3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Lysmd1Q9D0E3 Gm43799-201ENSMUST00000201845 579 ntBASIC21.75■■□□□ 1.07
Lysmd1Q9D0E3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd1Q9D0E3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd1Q9D0E3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd1Q9D0E3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd1Q9D0E3 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.74■■□□□ 1.07
Lysmd1Q9D0E3 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.74■■□□□ 1.07
Lysmd1Q9D0E3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lysmd1Q9D0E3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lysmd1Q9D0E3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lysmd1Q9D0E3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lysmd1Q9D0E3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.73■■□□□ 1.07
Lysmd1Q9D0E3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lysmd1Q9D0E3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lysmd1Q9D0E3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lysmd1Q9D0E3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Lysmd1Q9D0E3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.72■■□□□ 1.07
Lysmd1Q9D0E3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd1Q9D0E3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd1Q9D0E3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd1Q9D0E3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Lysmd1Q9D0E3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Gm10517-202ENSMUST00000192970 758 ntBASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd1Q9D0E3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Gm11249-201ENSMUST00000117071 859 ntBASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Gm6433-201ENSMUST00000118634 875 ntBASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd1Q9D0E3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 311 ms