Protein–RNA interactions for Protein: Q9CXS0

3110018I06Rik, RIKEN cDNA 3110018I06 gene, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110018I06RikQ9CXS0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Gm13241-201ENSMUST00000094493 780 ntBASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
3110018I06RikQ9CXS0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
3110018I06RikQ9CXS0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
3110018I06RikQ9CXS0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
3110018I06RikQ9CXS0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Mir6236-201ENSMUST00000184437 123 ntBASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
3110018I06RikQ9CXS0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.17■□□□□ 0.02
3110018I06RikQ9CXS0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
3110018I06RikQ9CXS0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms