Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud1Q9CUB6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otud1Q9CUB6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.84■□□□□ 0.61
Otud1Q9CUB6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Otud1Q9CUB6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Otud1Q9CUB6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otud1Q9CUB6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otud1Q9CUB6 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.83■□□□□ 0.61
Otud1Q9CUB6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otud1Q9CUB6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otud1Q9CUB6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.83■□□□□ 0.6
Otud1Q9CUB6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Otud1Q9CUB6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Otud1Q9CUB6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud1Q9CUB6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Otud1Q9CUB6 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.82■□□□□ 0.6
Otud1Q9CUB6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud1Q9CUB6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.82■□□□□ 0.6
Otud1Q9CUB6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Otud1Q9CUB6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Otud1Q9CUB6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.81■□□□□ 0.6
Otud1Q9CUB6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud1Q9CUB6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud1Q9CUB6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Gm40848-201ENSMUST00000221998 324 ntBASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otud1Q9CUB6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otud1Q9CUB6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud1Q9CUB6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Otud1Q9CUB6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Otud1Q9CUB6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otud1Q9CUB6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otud1Q9CUB6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otud1Q9CUB6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otud1Q9CUB6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms