Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.81■□□□□ 0.76
Lrrc40Q9CRC8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc40Q9CRC8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc40Q9CRC8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrc40Q9CRC8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrc40Q9CRC8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.78■□□□□ 0.76
Lrrc40Q9CRC8 Gm45102-201ENSMUST00000207427 857 ntBASIC19.78■□□□□ 0.76
Lrrc40Q9CRC8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrc40Q9CRC8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrc40Q9CRC8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 Rps24-207ENSMUST00000224568 714 ntBASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lrrc40Q9CRC8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lrrc40Q9CRC8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lrrc40Q9CRC8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lrrc40Q9CRC8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Lrrc40Q9CRC8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrrc40Q9CRC8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Gm14117-201ENSMUST00000122417 843 ntBASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrrc40Q9CRC8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrrc40Q9CRC8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrrc40Q9CRC8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrrc40Q9CRC8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.72■□□□□ 0.75
Lrrc40Q9CRC8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrrc40Q9CRC8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Lrrc40Q9CRC8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrrc40Q9CRC8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lrrc40Q9CRC8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrrc40Q9CRC8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
Lrrc40Q9CRC8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lrrc40Q9CRC8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.71■□□□□ 0.75
Lrrc40Q9CRC8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms