Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm7Q9CQQ8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm7Q9CQQ8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm7Q9CQQ8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm7Q9CQQ8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm7Q9CQQ8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm7Q9CQQ8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm7Q9CQQ8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lsm7Q9CQQ8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm7Q9CQQ8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm7Q9CQQ8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm7Q9CQQ8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm7Q9CQQ8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm7Q9CQQ8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm7Q9CQQ8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm7Q9CQQ8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Smad6-203ENSMUST00000179458 273 ntBASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Gm43060-201ENSMUST00000200621 289 ntBASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm7Q9CQQ8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.12■□□□□ 0.81
Lsm7Q9CQQ8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Gm18284-201ENSMUST00000172604 624 ntBASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lsm7Q9CQQ8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm7Q9CQQ8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Lsm7Q9CQQ8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.08■□□□□ 0.81
Lsm7Q9CQQ8 Gm8495-201ENSMUST00000188740 694 ntBASIC20.08■□□□□ 0.81
Lsm7Q9CQQ8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm7Q9CQQ8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm7Q9CQQ8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm7Q9CQQ8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm7Q9CQQ8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm7Q9CQQ8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm7Q9CQQ8 Gm11421-201ENSMUST00000122124 294 ntBASIC20.07■□□□□ 0.8
Lsm7Q9CQQ8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.06■□□□□ 0.8
Lsm7Q9CQQ8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Lsm7Q9CQQ8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms