Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Gm15546-201ENSMUST00000122095 826 ntBASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1Q9CQ70 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1Q9CQ70 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.29■□□□□ 0.2
H2afb1Q9CQ70 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1Q9CQ70 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1Q9CQ70 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1Q9CQ70 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
H2afb1Q9CQ70 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.29■□□□□ 0.2
H2afb1Q9CQ70 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.28■□□□□ 0.2
H2afb1Q9CQ70 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1Q9CQ70 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1Q9CQ70 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1Q9CQ70 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1Q9CQ70 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1Q9CQ70 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Etf1-202ENSMUST00000180351 108 ntBASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1Q9CQ70 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1Q9CQ70 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1Q9CQ70 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1Q9CQ70 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
H2afb1Q9CQ70 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1Q9CQ70 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1Q9CQ70 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.25■□□□□ 0.19
H2afb1Q9CQ70 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1Q9CQ70 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1Q9CQ70 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1Q9CQ70 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms