Protein–RNA interactions for Protein: Q99MJ9

Ddx50, ATP-dependent RNA helicase DDX50, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx50Q99MJ9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.78■■□□□ 1.08
Ddx50Q99MJ9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx50Q99MJ9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx50Q99MJ9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ddx50Q99MJ9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx50Q99MJ9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx50Q99MJ9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx50Q99MJ9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ddx50Q99MJ9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ddx50Q99MJ9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ddx50Q99MJ9 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.76■■□□□ 1.07
Ddx50Q99MJ9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ddx50Q99MJ9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx50Q99MJ9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Gm13148-201ENSMUST00000118892 745 ntBASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ddx50Q99MJ9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx50Q99MJ9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 Gm5408-201ENSMUST00000197998 747 ntBASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 Gm20049-201ENSMUST00000219950 730 ntBASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx50Q99MJ9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.72■■□□□ 1.07
Ddx50Q99MJ9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx50Q99MJ9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.72■■□□□ 1.07
Ddx50Q99MJ9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx50Q99MJ9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.72■■□□□ 1.07
Ddx50Q99MJ9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ddx50Q99MJ9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ddx50Q99MJ9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.7■■□□□ 1.06
Ddx50Q99MJ9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx50Q99MJ9 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.7■■□□□ 1.06
Ddx50Q99MJ9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx50Q99MJ9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ddx50Q99MJ9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx50Q99MJ9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx50Q99MJ9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx50Q99MJ9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx50Q99MJ9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms