Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx6-1Q99MA9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-1Q99MA9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx6-1Q99MA9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nkx6-1Q99MA9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-1Q99MA9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-1Q99MA9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-1Q99MA9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Gm10252-201ENSMUST00000209541 832 ntBASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-1Q99MA9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 Gm20760-201ENSMUST00000179197 648 ntBASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-1Q99MA9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-1Q99MA9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.64■□□□□ 0.57
Nkx6-1Q99MA9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms