Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcc1Q99LI2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcc1Q99LI2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcc1Q99LI2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Gm26833-201ENSMUST00000180899 440 ntBASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcc1Q99LI2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.69■□□□□ 0.74
Clcc1Q99LI2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcc1Q99LI2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcc1Q99LI2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clcc1Q99LI2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcc1Q99LI2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcc1Q99LI2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcc1Q99LI2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clcc1Q99LI2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Clcc1Q99LI2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcc1Q99LI2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Gm5874-201ENSMUST00000096101 508 ntBASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcc1Q99LI2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clcc1Q99LI2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clcc1Q99LI2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clcc1Q99LI2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Gm43060-201ENSMUST00000200621 289 ntBASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Clcc1Q99LI2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcc1Q99LI2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.62■□□□□ 0.73
Clcc1Q99LI2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.62■□□□□ 0.73
Clcc1Q99LI2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.62■□□□□ 0.73
Clcc1Q99LI2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.62■□□□□ 0.73
Clcc1Q99LI2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcc1Q99LI2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcc1Q99LI2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms