Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd3Q99LE3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.69■□□□□ 0.9
Lysmd3Q99LE3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Lysmd3Q99LE3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.69■□□□□ 0.9
Lysmd3Q99LE3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Lysmd3Q99LE3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd3Q99LE3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd3Q99LE3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lysmd3Q99LE3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd3Q99LE3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
Lysmd3Q99LE3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lysmd3Q99LE3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Lysmd3Q99LE3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd3Q99LE3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd3Q99LE3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd3Q99LE3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd3Q99LE3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Lysmd3Q99LE3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.64■□□□□ 0.89
Lysmd3Q99LE3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd3Q99LE3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd3Q99LE3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd3Q99LE3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd3Q99LE3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd3Q99LE3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd3Q99LE3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd3Q99LE3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lysmd3Q99LE3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Gm26833-201ENSMUST00000180899 440 ntBASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lysmd3Q99LE3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.6■□□□□ 0.89
Lysmd3Q99LE3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms