Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TrabdQ99JY4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TrabdQ99JY4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TrabdQ99JY4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TrabdQ99JY4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TrabdQ99JY4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TrabdQ99JY4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TrabdQ99JY4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TrabdQ99JY4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TrabdQ99JY4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TrabdQ99JY4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TrabdQ99JY4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.76■□□□□ 0.91
TrabdQ99JY4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TrabdQ99JY4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TrabdQ99JY4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TrabdQ99JY4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TrabdQ99JY4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.74■□□□□ 0.91
TrabdQ99JY4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Gm40848-201ENSMUST00000221998 324 ntBASIC20.74■□□□□ 0.91
TrabdQ99JY4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TrabdQ99JY4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.74■□□□□ 0.91
TrabdQ99JY4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TrabdQ99JY4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TrabdQ99JY4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TrabdQ99JY4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TrabdQ99JY4 Gm11421-201ENSMUST00000122124 294 ntBASIC20.73■□□□□ 0.91
TrabdQ99JY4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TrabdQ99JY4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TrabdQ99JY4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TrabdQ99JY4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TrabdQ99JY4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TrabdQ99JY4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TrabdQ99JY4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TrabdQ99JY4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TrabdQ99JY4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TrabdQ99JY4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TrabdQ99JY4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TrabdQ99JY4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
TrabdQ99JY4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TrabdQ99JY4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.71■□□□□ 0.91
TrabdQ99JY4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TrabdQ99JY4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
TrabdQ99JY4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TrabdQ99JY4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.7■□□□□ 0.9
TrabdQ99JY4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TrabdQ99JY4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TrabdQ99JY4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TrabdQ99JY4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TrabdQ99JY4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TrabdQ99JY4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.69■□□□□ 0.9
TrabdQ99JY4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TrabdQ99JY4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.69■□□□□ 0.9
TrabdQ99JY4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TrabdQ99JY4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TrabdQ99JY4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TrabdQ99JY4 Gm5874-201ENSMUST00000096101 508 ntBASIC20.69■□□□□ 0.9
TrabdQ99JY4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TrabdQ99JY4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TrabdQ99JY4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TrabdQ99JY4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TrabdQ99JY4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TrabdQ99JY4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
TrabdQ99JY4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TrabdQ99JY4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TrabdQ99JY4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TrabdQ99JY4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TrabdQ99JY4 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.67■□□□□ 0.9
TrabdQ99JY4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms