Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd2Q99JR8 Gm10602-201ENSMUST00000098239 609 ntBASIC20.26■□□□□ 0.83
Smarcd2Q99JR8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd2Q99JR8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd2Q99JR8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Smarcd2Q99JR8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcd2Q99JR8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Reep4-203ENSMUST00000226563 1444 ntBASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcd2Q99JR8 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcd2Q99JR8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd2Q99JR8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd2Q99JR8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd2Q99JR8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd2Q99JR8 Gm12933-201ENSMUST00000120203 872 ntBASIC20.23■□□□□ 0.83
Smarcd2Q99JR8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.23■□□□□ 0.83
Smarcd2Q99JR8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcd2Q99JR8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd2Q99JR8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd2Q99JR8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd2Q99JR8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcd2Q99JR8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Smarcd2Q99JR8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcd2Q99JR8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Smarcd2Q99JR8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcd2Q99JR8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcd2Q99JR8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd2Q99JR8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd2Q99JR8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd2Q99JR8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd2Q99JR8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd2Q99JR8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcd2Q99JR8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd2Q99JR8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd2Q99JR8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd2Q99JR8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd2Q99JR8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd2Q99JR8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd2Q99JR8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcd2Q99JR8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Smarcd2Q99JR8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd2Q99JR8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd2Q99JR8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd2Q99JR8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.16■□□□□ 0.82
Smarcd2Q99JR8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcd2Q99JR8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms