Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Rfc4Q99J62 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rfc4Q99J62 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.07■■□□□ 1.28
Rfc4Q99J62 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.07■■□□□ 1.28
Rfc4Q99J62 Mir6236-201ENSMUST00000184437 123 ntBASIC23.07■■□□□ 1.28
Rfc4Q99J62 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rfc4Q99J62 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfc4Q99J62 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfc4Q99J62 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfc4Q99J62 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfc4Q99J62 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc4Q99J62 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.05■■□□□ 1.28
Rfc4Q99J62 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc4Q99J62 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc4Q99J62 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.04■■□□□ 1.28
Rfc4Q99J62 Gm12933-201ENSMUST00000120203 872 ntBASIC23.04■■□□□ 1.28
Rfc4Q99J62 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc4Q99J62 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc4Q99J62 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.04■■□□□ 1.28
Rfc4Q99J62 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc4Q99J62 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc4Q99J62 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfc4Q99J62 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.03■■□□□ 1.28
Rfc4Q99J62 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfc4Q99J62 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfc4Q99J62 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.03■■□□□ 1.28
Rfc4Q99J62 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.02■■□□□ 1.28
Rfc4Q99J62 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.02■■□□□ 1.28
Rfc4Q99J62 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc4Q99J62 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.01■■□□□ 1.27
Rfc4Q99J62 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfc4Q99J62 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfc4Q99J62 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfc4Q99J62 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rfc4Q99J62 Gm13234-201ENSMUST00000120010 747 ntBASIC23■■□□□ 1.27
Rfc4Q99J62 Gm14281-201ENSMUST00000121700 1294 ntBASIC23■■□□□ 1.27
Rfc4Q99J62 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23■■□□□ 1.27
Rfc4Q99J62 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rfc4Q99J62 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rfc4Q99J62 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rfc4Q99J62 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rfc4Q99J62 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rfc4Q99J62 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rfc4Q99J62 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc4Q99J62 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rfc4Q99J62 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rfc4Q99J62 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Rfc4Q99J62 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.97■■□□□ 1.27
Rfc4Q99J62 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rfc4Q99J62 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rfc4Q99J62 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rfc4Q99J62 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rfc4Q99J62 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.96■■□□□ 1.27
Rfc4Q99J62 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms