Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd1Q99J36 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd1Q99J36 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd1Q99J36 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd1Q99J36 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd1Q99J36 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.72■□□□□ 0.43
Thumpd1Q99J36 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd1Q99J36 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd1Q99J36 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd1Q99J36 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd1Q99J36 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Thumpd1Q99J36 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.7■□□□□ 0.42
Thumpd1Q99J36 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd1Q99J36 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd1Q99J36 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Thumpd1Q99J36 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Gm10399-202ENSMUST00000202768 748 ntBASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms