Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp1aQ921W0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp1aQ921W0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp1aQ921W0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp1aQ921W0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.52■□□□□ 0.4
Chmp1aQ921W0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp1aQ921W0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp1aQ921W0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp1aQ921W0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp1aQ921W0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp1aQ921W0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp1aQ921W0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp1aQ921W0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp1aQ921W0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp1aQ921W0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp1aQ921W0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp1aQ921W0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp1aQ921W0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp1aQ921W0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp1aQ921W0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp1aQ921W0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp1aQ921W0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp1aQ921W0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp1aQ921W0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Chmp1aQ921W0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp1aQ921W0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp1aQ921W0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp1aQ921W0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp1aQ921W0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Gm10420-201ENSMUST00000121713 882 ntBASIC17.44■□□□□ 0.38
Chmp1aQ921W0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms