Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdha2Q91Y17 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
Pcdha2Q91Y17 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha2Q91Y17 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha2Q91Y17 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha2Q91Y17 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Gm43173-201ENSMUST00000202246 593 ntBASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha2Q91Y17 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdha2Q91Y17 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdha2Q91Y17 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Pcdha2Q91Y17 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.32■■□□□ 1
Pcdha2Q91Y17 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha2Q91Y17 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.31■■□□□ 1
Pcdha2Q91Y17 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha2Q91Y17 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Gm8493-201ENSMUST00000196881 489 ntBASIC21.3■■□□□ 1
Pcdha2Q91Y17 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha2Q91Y17 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha2Q91Y17 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.29■■□□□ 1
Pcdha2Q91Y17 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.29■■□□□ 1
Pcdha2Q91Y17 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.29■■□□□ 1
Pcdha2Q91Y17 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha2Q91Y17 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.29■■□□□ 1
Pcdha2Q91Y17 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha2Q91Y17 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha2Q91Y17 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha2Q91Y17 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha2Q91Y17 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Pcdha2Q91Y17 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.28■■□□□ 1
Pcdha2Q91Y17 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdha2Q91Y17 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha2Q91Y17 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha2Q91Y17 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha2Q91Y17 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha2Q91Y17 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.27■■□□□ 1
Pcdha2Q91Y17 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.27■■□□□ 1
Pcdha2Q91Y17 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.27■■□□□ 1
Pcdha2Q91Y17 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms