Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdha9Q91Y11 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdha9Q91Y11 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha9Q91Y11 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha9Q91Y11 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha9Q91Y11 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha9Q91Y11 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha9Q91Y11 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Gm27454-201ENSMUST00000185090 204 ntBASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha9Q91Y11 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha9Q91Y11 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha9Q91Y11 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms