Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb6Q91XZ4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb6Q91XZ4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb6Q91XZ4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb6Q91XZ4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb6Q91XZ4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdhb6Q91XZ4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb6Q91XZ4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb6Q91XZ4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdhb6Q91XZ4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb6Q91XZ4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb6Q91XZ4 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.52■□□□□ 0.88
Pcdhb6Q91XZ4 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.52■□□□□ 0.87
Pcdhb6Q91XZ4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhb6Q91XZ4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb6Q91XZ4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb6Q91XZ4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb6Q91XZ4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb6Q91XZ4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb6Q91XZ4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Pcdhb6Q91XZ4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb6Q91XZ4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb6Q91XZ4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb6Q91XZ4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb6Q91XZ4 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.49■□□□□ 0.87
Pcdhb6Q91XZ4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb6Q91XZ4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Gm9847-201ENSMUST00000052528 599 ntBASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb6Q91XZ4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb6Q91XZ4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb6Q91XZ4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb6Q91XZ4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdhb6Q91XZ4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdhb6Q91XZ4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb6Q91XZ4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb6Q91XZ4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb6Q91XZ4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms