Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc3Q91XX1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc3Q91XX1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc3Q91XX1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc3Q91XX1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc3Q91XX1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc3Q91XX1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc3Q91XX1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc3Q91XX1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhgc3Q91XX1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc3Q91XX1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgc3Q91XX1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgc3Q91XX1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgc3Q91XX1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgc3Q91XX1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgc3Q91XX1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgc3Q91XX1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgc3Q91XX1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhgc3Q91XX1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgc3Q91XX1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgc3Q91XX1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc3Q91XX1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc3Q91XX1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhgc3Q91XX1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc3Q91XX1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc3Q91XX1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc3Q91XX1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc3Q91XX1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc3Q91XX1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms