Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Cspg4Q8VHY0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg4Q8VHY0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg4Q8VHY0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg4Q8VHY0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg4Q8VHY0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg4Q8VHY0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.27■□□□□ 0.36
Cspg4Q8VHY0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Cspg4Q8VHY0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg4Q8VHY0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg4Q8VHY0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cspg4Q8VHY0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cspg4Q8VHY0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg4Q8VHY0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Gm9988-201ENSMUST00000069786 435 ntBASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Gm20049-201ENSMUST00000219950 730 ntBASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cspg4Q8VHY0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 Gm37856-201ENSMUST00000191634 999 ntBASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cspg4Q8VHY0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.23■□□□□ 0.35
Cspg4Q8VHY0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg4Q8VHY0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cspg4Q8VHY0 Gm7514-201ENSMUST00000209475 934 ntBASIC17.23■□□□□ 0.35
Cspg4Q8VHY0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg4Q8VHY0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg4Q8VHY0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cspg4Q8VHY0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cspg4Q8VHY0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cspg4Q8VHY0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cspg4Q8VHY0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg4Q8VHY0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Gm715-201ENSMUST00000117865 831 ntBASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg4Q8VHY0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms