Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh18Q8VHR0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Rarb-207ENSMUST00000225921 2756 ntBASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh18Q8VHR0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Gm5921-201ENSMUST00000075898 882 ntBASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh18Q8VHR0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh18Q8VHR0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh18Q8VHR0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh18Q8VHR0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh18Q8VHR0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdh18Q8VHR0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh18Q8VHR0 Golph3-205ENSMUST00000228671 2842 ntBASIC19.02■□□□□ 0.64
Pcdh18Q8VHR0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdh18Q8VHR0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh18Q8VHR0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh18Q8VHR0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh18Q8VHR0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh18Q8VHR0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh18Q8VHR0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh18Q8VHR0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms