Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r28Q8R2C9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r28Q8R2C9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vmn1r28Q8R2C9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vmn1r28Q8R2C9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vmn1r28Q8R2C9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Mir7075-201ENSMUST00000184187 82 ntBASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r28Q8R2C9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r28Q8R2C9 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.24■□□□□ 0.51
Vmn1r28Q8R2C9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vmn1r28Q8R2C9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vmn1r28Q8R2C9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Vmn1r28Q8R2C9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vmn1r28Q8R2C9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vmn1r28Q8R2C9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r28Q8R2C9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r28Q8R2C9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r28Q8R2C9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r28Q8R2C9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.23■□□□□ 0.51
Vmn1r28Q8R2C9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r28Q8R2C9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Gm12251-201ENSMUST00000117893 792 ntBASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r28Q8R2C9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r28Q8R2C9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.21■□□□□ 0.51
Vmn1r28Q8R2C9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r28Q8R2C9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.21■□□□□ 0.51
Vmn1r28Q8R2C9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r28Q8R2C9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r28Q8R2C9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r28Q8R2C9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms