Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpp40Q8R1F9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpp40Q8R1F9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpp40Q8R1F9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpp40Q8R1F9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpp40Q8R1F9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpp40Q8R1F9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpp40Q8R1F9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rpp40Q8R1F9 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.4■■□□□ 1.02
Rpp40Q8R1F9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpp40Q8R1F9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpp40Q8R1F9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rpp40Q8R1F9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Rpp40Q8R1F9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.39■■□□□ 1.01
Rpp40Q8R1F9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rpp40Q8R1F9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rpp40Q8R1F9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rpp40Q8R1F9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rpp40Q8R1F9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpp40Q8R1F9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpp40Q8R1F9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rpp40Q8R1F9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rpp40Q8R1F9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.36■■□□□ 1.01
Rpp40Q8R1F9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.36■■□□□ 1.01
Rpp40Q8R1F9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rpp40Q8R1F9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpp40Q8R1F9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp40Q8R1F9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp40Q8R1F9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.34■■□□□ 1.01
Rpp40Q8R1F9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.34■■□□□ 1.01
Rpp40Q8R1F9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp40Q8R1F9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp40Q8R1F9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms