Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8aQ8K442 Gm12669-201ENSMUST00000122162 1009 ntBASIC28.21■■■□□ 2.11
Abca8aQ8K442 Gm42778-201ENSMUST00000199644 553 ntBASIC28.21■■■□□ 2.11
Abca8aQ8K442 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Abca8aQ8K442 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC28.2■■■□□ 2.1
Abca8aQ8K442 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Abca8aQ8K442 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8aQ8K442 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8aQ8K442 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Abca8aQ8K442 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8aQ8K442 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC28.19■■■□□ 2.1
Abca8aQ8K442 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC28.19■■■□□ 2.1
Abca8aQ8K442 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Abca8aQ8K442 Gm9988-201ENSMUST00000069786 435 ntBASIC28.18■■■□□ 2.1
Abca8aQ8K442 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Abca8aQ8K442 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Abca8aQ8K442 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Abca8aQ8K442 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Abca8aQ8K442 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca8aQ8K442 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca8aQ8K442 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
Abca8aQ8K442 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca8aQ8K442 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC28.16■■■□□ 2.1
Abca8aQ8K442 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Abca8aQ8K442 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Abca8aQ8K442 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca8aQ8K442 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Abca8aQ8K442 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8aQ8K442 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8aQ8K442 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.09
Abca8aQ8K442 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Abca8aQ8K442 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8aQ8K442 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
Abca8aQ8K442 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Abca8aQ8K442 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8aQ8K442 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Abca8aQ8K442 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8aQ8K442 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8aQ8K442 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8aQ8K442 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC28.12■■■□□ 2.09
Abca8aQ8K442 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Abca8aQ8K442 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
Abca8aQ8K442 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
Abca8aQ8K442 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8aQ8K442 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8aQ8K442 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8aQ8K442 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8aQ8K442 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8aQ8K442 CT010467.1-202ENSMUST00000205406 714 ntBASIC28.1■■■□□ 2.09
Abca8aQ8K442 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC28.1■■■□□ 2.09
Abca8aQ8K442 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8aQ8K442 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8aQ8K442 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC28.1■■■□□ 2.09
Abca8aQ8K442 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8aQ8K442 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8aQ8K442 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8aQ8K442 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8aQ8K442 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8aQ8K442 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca8aQ8K442 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Abca8aQ8K442 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC28.08■■■□□ 2.09
Abca8aQ8K442 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca8aQ8K442 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8aQ8K442 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8aQ8K442 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8aQ8K442 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC28.07■■■□□ 2.08
Abca8aQ8K442 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8aQ8K442 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Abca8aQ8K442 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8aQ8K442 Gm13146-201ENSMUST00000118508 780 ntBASIC28.07■■■□□ 2.08
Abca8aQ8K442 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8aQ8K442 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8aQ8K442 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8aQ8K442 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8aQ8K442 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
Abca8aQ8K442 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Abca8aQ8K442 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
Abca8aQ8K442 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Abca8aQ8K442 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Abca8aQ8K442 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Abca8aQ8K442 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Abca8aQ8K442 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC28.04■■■□□ 2.08
Abca8aQ8K442 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Abca8aQ8K442 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8aQ8K442 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC28.03■■■□□ 2.08
Abca8aQ8K442 Gm32051-202ENSMUST00000197905 2385 ntBASIC28.03■■■□□ 2.08
Abca8aQ8K442 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8aQ8K442 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8aQ8K442 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8aQ8K442 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8aQ8K442 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8aQ8K442 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC28.03■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms