Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn1Q8K0T0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn1Q8K0T0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn1Q8K0T0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23■■□□□ 1.27
Rtn1Q8K0T0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn1Q8K0T0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Rtn1Q8K0T0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn1Q8K0T0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.97■■□□□ 1.27
Rtn1Q8K0T0 Gm43137-201ENSMUST00000198052 594 ntBASIC22.97■■□□□ 1.27
Rtn1Q8K0T0 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.97■■□□□ 1.27
Rtn1Q8K0T0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn1Q8K0T0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn1Q8K0T0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn1Q8K0T0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn1Q8K0T0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn1Q8K0T0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
Rtn1Q8K0T0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn1Q8K0T0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.95■■□□□ 1.26
Rtn1Q8K0T0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn1Q8K0T0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn1Q8K0T0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtn1Q8K0T0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms