Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trpm6Q8CIR4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trpm6Q8CIR4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trpm6Q8CIR4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.13■□□□□ 0.81
Trpm6Q8CIR4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trpm6Q8CIR4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trpm6Q8CIR4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trpm6Q8CIR4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trpm6Q8CIR4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.11■□□□□ 0.81
Trpm6Q8CIR4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trpm6Q8CIR4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trpm6Q8CIR4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trpm6Q8CIR4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trpm6Q8CIR4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.11■□□□□ 0.81
Trpm6Q8CIR4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trpm6Q8CIR4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Gm9988-201ENSMUST00000069786 435 ntBASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
Trpm6Q8CIR4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trpm6Q8CIR4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.08■□□□□ 0.81
Trpm6Q8CIR4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
Trpm6Q8CIR4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trpm6Q8CIR4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.08■□□□□ 0.8
Trpm6Q8CIR4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trpm6Q8CIR4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trpm6Q8CIR4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.08■□□□□ 0.8
Trpm6Q8CIR4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 Reep4-203ENSMUST00000226563 1444 ntBASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trpm6Q8CIR4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.06■□□□□ 0.8
Trpm6Q8CIR4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Gm13234-201ENSMUST00000120010 747 ntBASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trpm6Q8CIR4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trpm6Q8CIR4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms