Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.97■□□□□ 0.79
Clip4Q8CI96 Gm9870-201ENSMUST00000063874 645 ntBASIC19.97■□□□□ 0.79
Clip4Q8CI96 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clip4Q8CI96 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Clip4Q8CI96 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip4Q8CI96 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip4Q8CI96 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.96■□□□□ 0.79
Clip4Q8CI96 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.96■□□□□ 0.79
Clip4Q8CI96 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.96■□□□□ 0.79
Clip4Q8CI96 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.96■□□□□ 0.79
Clip4Q8CI96 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.79
Clip4Q8CI96 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Clip4Q8CI96 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Clip4Q8CI96 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.95■□□□□ 0.78
Clip4Q8CI96 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip4Q8CI96 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.95■□□□□ 0.78
Clip4Q8CI96 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip4Q8CI96 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip4Q8CI96 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip4Q8CI96 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.95■□□□□ 0.78
Clip4Q8CI96 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Gm21956-201ENSMUST00000179946 522 ntBASIC19.94■□□□□ 0.78
Clip4Q8CI96 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Golgb1-201ENSMUST00000023534 498 ntBASIC19.94■□□□□ 0.78
Clip4Q8CI96 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip4Q8CI96 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip4Q8CI96 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clip4Q8CI96 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.92■□□□□ 0.78
Clip4Q8CI96 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.92■□□□□ 0.78
Clip4Q8CI96 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.92■□□□□ 0.78
Clip4Q8CI96 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip4Q8CI96 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip4Q8CI96 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip4Q8CI96 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Clip4Q8CI96 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clip4Q8CI96 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip4Q8CI96 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.9■□□□□ 0.78
Clip4Q8CI96 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Gm7143-201ENSMUST00000222811 859 ntBASIC19.9■□□□□ 0.78
Clip4Q8CI96 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip4Q8CI96 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Clip4Q8CI96 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip4Q8CI96 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.89■□□□□ 0.77
Clip4Q8CI96 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.89■□□□□ 0.77
Clip4Q8CI96 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.89■□□□□ 0.77
Clip4Q8CI96 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.89■□□□□ 0.77
Clip4Q8CI96 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip4Q8CI96 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip4Q8CI96 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms