Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hist1h2aaQ8CGP4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hist1h2aaQ8CGP4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hist1h2aaQ8CGP4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hist1h2aaQ8CGP4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h2aaQ8CGP4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h2aaQ8CGP4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h2aaQ8CGP4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h2aaQ8CGP4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h2aaQ8CGP4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h2aaQ8CGP4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist1h2aaQ8CGP4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist1h2aaQ8CGP4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h2aaQ8CGP4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h2aaQ8CGP4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.69■□□□□ 0.58
Hist1h2aaQ8CGP4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h2aaQ8CGP4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h2aaQ8CGP4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h2aaQ8CGP4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hist1h2aaQ8CGP4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Mir6236-201ENSMUST00000184437 123 ntBASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist1h2aaQ8CGP4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Gm12922-201ENSMUST00000120626 809 ntBASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hist1h2aaQ8CGP4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Hist1h2aaQ8CGP4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist1h2aaQ8CGP4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hist1h2aaQ8CGP4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hist1h2aaQ8CGP4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hist1h2aaQ8CGP4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2aaQ8CGP4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2aaQ8CGP4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms