Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist3h2bbQ8CGP0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist3h2bbQ8CGP0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist3h2bbQ8CGP0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist3h2bbQ8CGP0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hist3h2bbQ8CGP0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist3h2bbQ8CGP0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hist3h2bbQ8CGP0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hist3h2bbQ8CGP0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hist3h2bbQ8CGP0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hist3h2bbQ8CGP0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.15■□□□□ 0.02
Hist3h2bbQ8CGP0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist3h2bbQ8CGP0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hist3h2bbQ8CGP0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.14■□□□□ 0.01
Hist3h2bbQ8CGP0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.14■□□□□ 0.01
Hist3h2bbQ8CGP0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist3h2bbQ8CGP0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hist3h2bbQ8CGP0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.13■□□□□ 0.01
Hist3h2bbQ8CGP0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist3h2bbQ8CGP0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist3h2bbQ8CGP0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hist3h2bbQ8CGP0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist3h2bbQ8CGP0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms