Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rp1l1Q8CGM2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rp1l1Q8CGM2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rp1l1Q8CGM2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
Rp1l1Q8CGM2 Gm13146-201ENSMUST00000118508 780 ntBASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rp1l1Q8CGM2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Rp1l1Q8CGM2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rp1l1Q8CGM2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rp1l1Q8CGM2 Mir6236-201ENSMUST00000184437 123 ntBASIC21.13■□□□□ 0.97
Rp1l1Q8CGM2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.13■□□□□ 0.97
Rp1l1Q8CGM2 Gm13168-201ENSMUST00000121771 632 ntBASIC21.13■□□□□ 0.97
Rp1l1Q8CGM2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.13■□□□□ 0.97
Rp1l1Q8CGM2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rp1l1Q8CGM2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rp1l1Q8CGM2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rp1l1Q8CGM2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Rp1l1Q8CGM2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rp1l1Q8CGM2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.1■□□□□ 0.97
Rp1l1Q8CGM2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rp1l1Q8CGM2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rp1l1Q8CGM2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.1■□□□□ 0.97
Rp1l1Q8CGM2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Gm6211-202ENSMUST00000167849 925 ntBASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Gm8520-201ENSMUST00000186517 868 ntBASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Gm26524-201ENSMUST00000192339 390 ntBASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Gm5408-201ENSMUST00000197998 747 ntBASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.09■□□□□ 0.97
Rp1l1Q8CGM2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rp1l1Q8CGM2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.08■□□□□ 0.97
Rp1l1Q8CGM2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rp1l1Q8CGM2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rp1l1Q8CGM2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rp1l1Q8CGM2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rp1l1Q8CGM2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rp1l1Q8CGM2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rp1l1Q8CGM2 Gm20049-201ENSMUST00000219950 730 ntBASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rp1l1Q8CGM2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rp1l1Q8CGM2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rp1l1Q8CGM2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rp1l1Q8CGM2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rp1l1Q8CGM2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rp1l1Q8CGM2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.06■□□□□ 0.96
Rp1l1Q8CGM2 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms