Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Smc4Q8CG47 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.66■■□□□ 1.54
Smc4Q8CG47 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Smc4Q8CG47 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Smc4Q8CG47 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Smc4Q8CG47 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.65■■□□□ 1.54
Smc4Q8CG47 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Smc4Q8CG47 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Smc4Q8CG47 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.65■■□□□ 1.54
Smc4Q8CG47 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Smc4Q8CG47 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Smc4Q8CG47 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Smc4Q8CG47 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Smc4Q8CG47 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Smc4Q8CG47 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.63■■□□□ 1.53
Smc4Q8CG47 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.63■■□□□ 1.53
Smc4Q8CG47 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Smc4Q8CG47 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.63■■□□□ 1.53
Smc4Q8CG47 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Smc4Q8CG47 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Smc4Q8CG47 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Smc4Q8CG47 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.62■■□□□ 1.53
Smc4Q8CG47 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.62■■□□□ 1.53
Smc4Q8CG47 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
Smc4Q8CG47 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Smc4Q8CG47 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc4Q8CG47 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc4Q8CG47 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc4Q8CG47 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc4Q8CG47 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc4Q8CG47 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc4Q8CG47 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Smc4Q8CG47 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc4Q8CG47 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc4Q8CG47 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc4Q8CG47 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc4Q8CG47 Gm40848-201ENSMUST00000221998 324 ntBASIC24.6■■□□□ 1.53
Smc4Q8CG47 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Smc4Q8CG47 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc4Q8CG47 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc4Q8CG47 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Smc4Q8CG47 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc4Q8CG47 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
Smc4Q8CG47 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Smc4Q8CG47 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Smc4Q8CG47 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Smc4Q8CG47 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smc4Q8CG47 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smc4Q8CG47 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Smc4Q8CG47 Gm11421-201ENSMUST00000122124 294 ntBASIC24.57■■□□□ 1.52
Smc4Q8CG47 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.57■■□□□ 1.52
Smc4Q8CG47 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Smc4Q8CG47 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smc4Q8CG47 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smc4Q8CG47 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Smc4Q8CG47 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Smc4Q8CG47 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Smc4Q8CG47 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Smc4Q8CG47 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Smc4Q8CG47 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Smc4Q8CG47 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Smc4Q8CG47 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Smc4Q8CG47 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Smc4Q8CG47 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.54■■□□□ 1.52
Smc4Q8CG47 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc4Q8CG47 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Smc4Q8CG47 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Smc4Q8CG47 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc4Q8CG47 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc4Q8CG47 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Smc4Q8CG47 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
Smc4Q8CG47 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Smc4Q8CG47 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.53■■□□□ 1.52
Smc4Q8CG47 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Smc4Q8CG47 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Smc4Q8CG47 Gm5874-201ENSMUST00000096101 508 ntBASIC24.53■■□□□ 1.52
Smc4Q8CG47 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Smc4Q8CG47 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Smc4Q8CG47 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Smc4Q8CG47 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Smc4Q8CG47 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Smc4Q8CG47 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC24.52■■□□□ 1.52
Smc4Q8CG47 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Smc4Q8CG47 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Smc4Q8CG47 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC24.52■■□□□ 1.52
Smc4Q8CG47 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.51■■□□□ 1.51
Smc4Q8CG47 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms