Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pabpn1Q8CCS6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pabpn1Q8CCS6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Pabpn1Q8CCS6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
Pabpn1Q8CCS6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Pabpn1Q8CCS6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pabpn1Q8CCS6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pabpn1Q8CCS6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Pabpn1Q8CCS6 Gm21362-201ENSMUST00000194272 928 ntBASIC31.73■■■□□ 2.67
Pabpn1Q8CCS6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pabpn1Q8CCS6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pabpn1Q8CCS6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Pabpn1Q8CCS6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.72■■■□□ 2.67
Pabpn1Q8CCS6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Pabpn1Q8CCS6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pabpn1Q8CCS6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Pabpn1Q8CCS6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC31.72■■■□□ 2.67
Pabpn1Q8CCS6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pabpn1Q8CCS6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Pabpn1Q8CCS6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Pabpn1Q8CCS6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
Pabpn1Q8CCS6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC31.7■■■□□ 2.67
Pabpn1Q8CCS6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC31.7■■■□□ 2.67
Pabpn1Q8CCS6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC31.7■■■□□ 2.67
Pabpn1Q8CCS6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Pabpn1Q8CCS6 Gm10655-201ENSMUST00000098658 1397 ntBASIC31.69■■■□□ 2.66
Pabpn1Q8CCS6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Pabpn1Q8CCS6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC31.69■■■□□ 2.66
Pabpn1Q8CCS6 Gm37055-201ENSMUST00000191866 133 ntBASIC31.69■■■□□ 2.66
Pabpn1Q8CCS6 Gm10459-201ENSMUST00000202708 1155 ntBASIC31.69■■■□□ 2.66
Pabpn1Q8CCS6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC31.69■■■□□ 2.66
Pabpn1Q8CCS6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC31.69■■■□□ 2.66
Pabpn1Q8CCS6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pabpn1Q8CCS6 Gm9484-201ENSMUST00000195892 1159 ntBASIC31.68■■■□□ 2.66
Pabpn1Q8CCS6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC31.68■■■□□ 2.66
Pabpn1Q8CCS6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pabpn1Q8CCS6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pabpn1Q8CCS6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 Rab3c-203ENSMUST00000224180 967 ntBASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pabpn1Q8CCS6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC31.66■■■□□ 2.66
Pabpn1Q8CCS6 AC154649.1-201ENSMUST00000227392 384 ntBASIC31.66■■■□□ 2.66
Pabpn1Q8CCS6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pabpn1Q8CCS6 Gm10571-201ENSMUST00000097869 1638 ntBASIC31.66■■■□□ 2.66
Pabpn1Q8CCS6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pabpn1Q8CCS6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pabpn1Q8CCS6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pabpn1Q8CCS6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC31.65■■■□□ 2.66
Pabpn1Q8CCS6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Pabpn1Q8CCS6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
Pabpn1Q8CCS6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pabpn1Q8CCS6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pabpn1Q8CCS6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC31.63■■■□□ 2.65
Pabpn1Q8CCS6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Pabpn1Q8CCS6 Gm27741-201ENSMUST00000185060 237 ntBASIC31.63■■■□□ 2.65
Pabpn1Q8CCS6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pabpn1Q8CCS6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Pabpn1Q8CCS6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pabpn1Q8CCS6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pabpn1Q8CCS6 CT010467.1-202ENSMUST00000205406 714 ntBASIC31.62■■■□□ 2.65
Pabpn1Q8CCS6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pabpn1Q8CCS6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pabpn1Q8CCS6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Pabpn1Q8CCS6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pabpn1Q8CCS6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pabpn1Q8CCS6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pabpn1Q8CCS6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC31.6■■■□□ 2.65
Pabpn1Q8CCS6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Pabpn1Q8CCS6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pabpn1Q8CCS6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC31.6■■■□□ 2.65
Pabpn1Q8CCS6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Pabpn1Q8CCS6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pabpn1Q8CCS6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Pabpn1Q8CCS6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pabpn1Q8CCS6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Pabpn1Q8CCS6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pabpn1Q8CCS6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pabpn1Q8CCS6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pabpn1Q8CCS6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Pabpn1Q8CCS6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC31.58■■■□□ 2.65
Pabpn1Q8CCS6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Pabpn1Q8CCS6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pabpn1Q8CCS6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pabpn1Q8CCS6 Gm12896-201ENSMUST00000118430 226 ntBASIC31.57■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms