Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Uba3Q8C878 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uba3Q8C878 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uba3Q8C878 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Uba3Q8C878 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uba3Q8C878 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uba3Q8C878 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uba3Q8C878 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Uba3Q8C878 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uba3Q8C878 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21■□□□□ 0.95
Uba3Q8C878 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21■□□□□ 0.95
Uba3Q8C878 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21■□□□□ 0.95
Uba3Q8C878 Appbp2os-202ENSMUST00000206972 447 ntBASIC21■□□□□ 0.95
Uba3Q8C878 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uba3Q8C878 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21■□□□□ 0.95
Uba3Q8C878 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.99■□□□□ 0.95
Uba3Q8C878 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uba3Q8C878 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uba3Q8C878 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.99■□□□□ 0.95
Uba3Q8C878 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.99■□□□□ 0.95
Uba3Q8C878 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.99■□□□□ 0.95
Uba3Q8C878 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
Uba3Q8C878 Gm27454-201ENSMUST00000185090 204 ntBASIC20.99■□□□□ 0.95
Uba3Q8C878 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
Uba3Q8C878 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uba3Q8C878 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Uba3Q8C878 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.98■□□□□ 0.95
Uba3Q8C878 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Gm12821-201ENSMUST00000120022 600 ntBASIC20.98■□□□□ 0.95
Uba3Q8C878 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Uba3Q8C878 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba3Q8C878 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Uba3Q8C878 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uba3Q8C878 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Uba3Q8C878 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Uba3Q8C878 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Uba3Q8C878 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uba3Q8C878 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Uba3Q8C878 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Uba3Q8C878 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Uba3Q8C878 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Uba3Q8C878 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Uba3Q8C878 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uba3Q8C878 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Uba3Q8C878 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uba3Q8C878 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uba3Q8C878 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uba3Q8C878 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uba3Q8C878 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uba3Q8C878 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Uba3Q8C878 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uba3Q8C878 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Uba3Q8C878 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.95■□□□□ 0.94
Uba3Q8C878 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uba3Q8C878 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uba3Q8C878 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uba3Q8C878 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uba3Q8C878 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Uba3Q8C878 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.94■□□□□ 0.94
Uba3Q8C878 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uba3Q8C878 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.94■□□□□ 0.94
Uba3Q8C878 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Uba3Q8C878 Gm45417-201ENSMUST00000209533 758 ntBASIC20.94■□□□□ 0.94
Uba3Q8C878 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uba3Q8C878 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uba3Q8C878 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.94■□□□□ 0.94
Uba3Q8C878 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uba3Q8C878 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Uba3Q8C878 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Uba3Q8C878 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Uba3Q8C878 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Uba3Q8C878 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Uba3Q8C878 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uba3Q8C878 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uba3Q8C878 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.93■□□□□ 0.94
Uba3Q8C878 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Uba3Q8C878 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uba3Q8C878 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Uba3Q8C878 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Uba3Q8C878 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uba3Q8C878 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uba3Q8C878 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uba3Q8C878 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Uba3Q8C878 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Uba3Q8C878 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uba3Q8C878 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.92■□□□□ 0.94
Uba3Q8C878 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Uba3Q8C878 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms