Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp44Q8C2S0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Usp44Q8C2S0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Usp44Q8C2S0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Usp44Q8C2S0 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.47■■□□□ 1.35
Usp44Q8C2S0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Usp44Q8C2S0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Usp44Q8C2S0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
Usp44Q8C2S0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp44Q8C2S0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp44Q8C2S0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp44Q8C2S0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Usp44Q8C2S0 Gm43137-201ENSMUST00000198052 594 ntBASIC23.45■■□□□ 1.34
Usp44Q8C2S0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp44Q8C2S0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp44Q8C2S0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp44Q8C2S0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.44■■□□□ 1.34
Usp44Q8C2S0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Usp44Q8C2S0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Usp44Q8C2S0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Usp44Q8C2S0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Usp44Q8C2S0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Usp44Q8C2S0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Usp44Q8C2S0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Usp44Q8C2S0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Usp44Q8C2S0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Usp44Q8C2S0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Usp44Q8C2S0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Usp44Q8C2S0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Usp44Q8C2S0 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.4■■□□□ 1.34
Usp44Q8C2S0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.4■■□□□ 1.34
Usp44Q8C2S0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Usp44Q8C2S0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Usp44Q8C2S0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Usp44Q8C2S0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Usp44Q8C2S0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.38■■□□□ 1.33
Usp44Q8C2S0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Gm12251-201ENSMUST00000117893 792 ntBASIC23.37■■□□□ 1.33
Usp44Q8C2S0 Gm27454-201ENSMUST00000185090 204 ntBASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms