Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf2Q8BZT2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sh3rf2Q8BZT2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sh3rf2Q8BZT2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf2Q8BZT2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3rf2Q8BZT2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.25■□□□□ 0.83
Sh3rf2Q8BZT2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3rf2Q8BZT2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3rf2Q8BZT2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3rf2Q8BZT2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.21■□□□□ 0.83
Sh3rf2Q8BZT2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf2Q8BZT2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Sh3rf2Q8BZT2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.21■□□□□ 0.83
Sh3rf2Q8BZT2 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.21■□□□□ 0.83
Sh3rf2Q8BZT2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf2Q8BZT2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3rf2Q8BZT2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sh3rf2Q8BZT2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Gm26571-201ENSMUST00000181399 666 ntBASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3rf2Q8BZT2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3rf2Q8BZT2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Sh3rf2Q8BZT2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms