Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3dQ8BX13 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3dQ8BX13 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.59■□□□□ 0.41
Ube3dQ8BX13 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3dQ8BX13 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube3dQ8BX13 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.58■□□□□ 0.41
Ube3dQ8BX13 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Ube3dQ8BX13 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube3dQ8BX13 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube3dQ8BX13 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3dQ8BX13 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3dQ8BX13 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3dQ8BX13 Gm27454-201ENSMUST00000185090 204 ntBASIC17.58■□□□□ 0.4
Ube3dQ8BX13 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.58■□□□□ 0.4
Ube3dQ8BX13 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3dQ8BX13 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3dQ8BX13 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.56■□□□□ 0.4
Ube3dQ8BX13 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Gm7143-201ENSMUST00000222811 859 ntBASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3dQ8BX13 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms