Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf7Q8BTV2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf7Q8BTV2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.91■□□□□ 0.78
Cpsf7Q8BTV2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf7Q8BTV2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf7Q8BTV2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.91■□□□□ 0.78
Cpsf7Q8BTV2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf7Q8BTV2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 Gm5812-201ENSMUST00000061073 957 ntBASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf7Q8BTV2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cpsf7Q8BTV2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cpsf7Q8BTV2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf7Q8BTV2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf7Q8BTV2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf7Q8BTV2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf7Q8BTV2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf7Q8BTV2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf7Q8BTV2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf7Q8BTV2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf7Q8BTV2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf7Q8BTV2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf7Q8BTV2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Cpsf7Q8BTV2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf7Q8BTV2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf7Q8BTV2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Cpsf7Q8BTV2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf7Q8BTV2 Gm43566-201ENSMUST00000196851 808 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms