Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Gm15039-201ENSMUST00000118914 875 ntBASIC20.29■□□□□ 0.84
Suds3Q8BR65 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Suds3Q8BR65 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Gm21956-201ENSMUST00000179946 522 ntBASIC20.28■□□□□ 0.84
Suds3Q8BR65 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Suds3Q8BR65 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Suds3Q8BR65 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Suds3Q8BR65 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Suds3Q8BR65 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Suds3Q8BR65 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Suds3Q8BR65 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Suds3Q8BR65 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Suds3Q8BR65 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Suds3Q8BR65 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.25■□□□□ 0.83
Suds3Q8BR65 Gm7143-201ENSMUST00000222811 859 ntBASIC20.25■□□□□ 0.83
Suds3Q8BR65 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Suds3Q8BR65 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Suds3Q8BR65 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Suds3Q8BR65 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Suds3Q8BR65 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Suds3Q8BR65 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Suds3Q8BR65 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Suds3Q8BR65 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Suds3Q8BR65 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Suds3Q8BR65 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Suds3Q8BR65 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Suds3Q8BR65 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Suds3Q8BR65 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Suds3Q8BR65 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Suds3Q8BR65 Gm12922-201ENSMUST00000120626 809 ntBASIC20.2■□□□□ 0.82
Suds3Q8BR65 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.2■□□□□ 0.82
Suds3Q8BR65 Golgb1-201ENSMUST00000023534 498 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms