Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm27801-201ENSMUST00000184174 223 ntBASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Col16a1Q8BLX7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Col16a1Q8BLX7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Col16a1Q8BLX7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC26.69■■□□□ 1.86
Col16a1Q8BLX7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.69■■□□□ 1.86
Col16a1Q8BLX7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Col16a1Q8BLX7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC26.68■■□□□ 1.86
Col16a1Q8BLX7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Col16a1Q8BLX7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Col16a1Q8BLX7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col16a1Q8BLX7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col16a1Q8BLX7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col16a1Q8BLX7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Col16a1Q8BLX7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Gm42555-201ENSMUST00000199304 1039 ntBASIC26.67■■□□□ 1.86
Col16a1Q8BLX7 Gm26766-202ENSMUST00000227544 2347 ntBASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Gm4968-201ENSMUST00000071458 858 ntBASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col16a1Q8BLX7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col16a1Q8BLX7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col16a1Q8BLX7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col16a1Q8BLX7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC26.65■■□□□ 1.86
Col16a1Q8BLX7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col16a1Q8BLX7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col16a1Q8BLX7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col16a1Q8BLX7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC26.64■■□□□ 1.86
Col16a1Q8BLX7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col16a1Q8BLX7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col16a1Q8BLX7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Col16a1Q8BLX7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Col16a1Q8BLX7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Col16a1Q8BLX7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col16a1Q8BLX7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col16a1Q8BLX7 Gm7514-201ENSMUST00000209475 934 ntBASIC26.62■■□□□ 1.85
Col16a1Q8BLX7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col16a1Q8BLX7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col16a1Q8BLX7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.61■■□□□ 1.85
Col16a1Q8BLX7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Col16a1Q8BLX7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC26.61■■□□□ 1.85
Col16a1Q8BLX7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col16a1Q8BLX7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col16a1Q8BLX7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col16a1Q8BLX7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Col16a1Q8BLX7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col16a1Q8BLX7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
Col16a1Q8BLX7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC26.6■■□□□ 1.85
Col16a1Q8BLX7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col16a1Q8BLX7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col16a1Q8BLX7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col16a1Q8BLX7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col16a1Q8BLX7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Gm12527-201ENSMUST00000117967 564 ntBASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
Col16a1Q8BLX7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col16a1Q8BLX7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col16a1Q8BLX7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col16a1Q8BLX7 Mir5133-201ENSMUST00000174955 77 ntBASIC26.57■■□□□ 1.84
Col16a1Q8BLX7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Col16a1Q8BLX7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms