Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkl3Q8BLF2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl3Q8BLF2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl3Q8BLF2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Gm6311-201ENSMUST00000073790 878 ntBASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl3Q8BLF2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Cdkl3Q8BLF2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl3Q8BLF2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.08■□□□□ 0.33
Cdkl3Q8BLF2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl3Q8BLF2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl3Q8BLF2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cdkl3Q8BLF2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl3Q8BLF2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl3Q8BLF2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms