Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc40Q8BI79 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc40Q8BI79 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Gm22238-201ENSMUST00000175222 88 ntBASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc40Q8BI79 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc40Q8BI79 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc40Q8BI79 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc40Q8BI79 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc40Q8BI79 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc40Q8BI79 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc40Q8BI79 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc40Q8BI79 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc40Q8BI79 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Gm14117-201ENSMUST00000122417 843 ntBASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc40Q8BI79 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.56■□□□□ 0.88
Ccdc40Q8BI79 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc40Q8BI79 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc40Q8BI79 Gm43530-201ENSMUST00000195920 274 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms