Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf38Q8BI21 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Gm15820-201ENSMUST00000201566 728 ntBASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Rnf38Q8BI21 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf38Q8BI21 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf38Q8BI21 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.17■□□□□ 0.66
Rnf38Q8BI21 Gm7143-201ENSMUST00000222811 859 ntBASIC19.17■□□□□ 0.66
Rnf38Q8BI21 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf38Q8BI21 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf38Q8BI21 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf38Q8BI21 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Rnf38Q8BI21 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf38Q8BI21 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf38Q8BI21 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf38Q8BI21 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf38Q8BI21 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf38Q8BI21 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf38Q8BI21 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Rnf38Q8BI21 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf38Q8BI21 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.12■□□□□ 0.65
Rnf38Q8BI21 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rnf38Q8BI21 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf38Q8BI21 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf38Q8BI21 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf38Q8BI21 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rnf38Q8BI21 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms