Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.24■□□□□ 0.67
Trim23Q8BGX0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim23Q8BGX0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim23Q8BGX0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Gm15039-201ENSMUST00000118914 875 ntBASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Gm8493-201ENSMUST00000196881 489 ntBASIC19.22■□□□□ 0.67
Trim23Q8BGX0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim23Q8BGX0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim23Q8BGX0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Trim23Q8BGX0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim23Q8BGX0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim23Q8BGX0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Serp2-204ENSMUST00000228055 705 ntBASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim23Q8BGX0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim23Q8BGX0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim23Q8BGX0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim23Q8BGX0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim23Q8BGX0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Trim23Q8BGX0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim23Q8BGX0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim23Q8BGX0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms