Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.15■□□□□ 0.66
Trim36Q80WG7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trim36Q80WG7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trim36Q80WG7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim36Q80WG7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.14■□□□□ 0.65
Trim36Q80WG7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.14■□□□□ 0.65
Trim36Q80WG7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim36Q80WG7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim36Q80WG7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim36Q80WG7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim36Q80WG7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.12■□□□□ 0.65
Trim36Q80WG7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim36Q80WG7 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.12■□□□□ 0.65
Trim36Q80WG7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim36Q80WG7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim36Q80WG7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim36Q80WG7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim36Q80WG7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim36Q80WG7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim36Q80WG7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim36Q80WG7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim36Q80WG7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim36Q80WG7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim36Q80WG7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim36Q80WG7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim36Q80WG7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim36Q80WG7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim36Q80WG7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim36Q80WG7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim36Q80WG7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trim36Q80WG7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim36Q80WG7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim36Q80WG7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim36Q80WG7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim36Q80WG7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim36Q80WG7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.09■□□□□ 0.65
Trim36Q80WG7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim36Q80WG7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim36Q80WG7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim36Q80WG7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim36Q80WG7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim36Q80WG7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim36Q80WG7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim36Q80WG7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim36Q80WG7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim36Q80WG7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim36Q80WG7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim36Q80WG7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim36Q80WG7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms