Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnrc18Q80WC3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnrc18Q80WC3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnrc18Q80WC3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.28■□□□□ 0.84
Tnrc18Q80WC3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.28■□□□□ 0.84
Tnrc18Q80WC3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Tnrc18Q80WC3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnrc18Q80WC3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.27■□□□□ 0.84
Tnrc18Q80WC3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnrc18Q80WC3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.27■□□□□ 0.84
Tnrc18Q80WC3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnrc18Q80WC3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnrc18Q80WC3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tnrc18Q80WC3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tnrc18Q80WC3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnrc18Q80WC3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tnrc18Q80WC3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.26■□□□□ 0.83
Tnrc18Q80WC3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc18Q80WC3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc18Q80WC3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc18Q80WC3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc18Q80WC3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.24■□□□□ 0.83
Tnrc18Q80WC3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc18Q80WC3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc18Q80WC3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc18Q80WC3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc18Q80WC3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.23■□□□□ 0.83
Tnrc18Q80WC3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc18Q80WC3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc18Q80WC3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Tnrc18Q80WC3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc18Q80WC3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tnrc18Q80WC3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc18Q80WC3 Gm26524-201ENSMUST00000192339 390 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Gm7290-201ENSMUST00000104990 617 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Gm12918-201ENSMUST00000120234 636 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Gm13168-201ENSMUST00000121771 632 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Gm15710-201ENSMUST00000121821 636 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Gm5075-201ENSMUST00000196916 622 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc18Q80WC3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Tnrc18Q80WC3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.2■□□□□ 0.83
Tnrc18Q80WC3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc18Q80WC3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnrc18Q80WC3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.18■□□□□ 0.82
Tnrc18Q80WC3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.18■□□□□ 0.82
Tnrc18Q80WC3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc18Q80WC3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc18Q80WC3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc18Q80WC3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.17■□□□□ 0.82
Tnrc18Q80WC3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc18Q80WC3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc18Q80WC3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms