Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh8Q7TSK3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh8Q7TSK3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh8Q7TSK3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh8Q7TSK3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh8Q7TSK3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdh8Q7TSK3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh8Q7TSK3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh8Q7TSK3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Pcdh8Q7TSK3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh8Q7TSK3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh8Q7TSK3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh8Q7TSK3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh8Q7TSK3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh8Q7TSK3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh8Q7TSK3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdh8Q7TSK3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh8Q7TSK3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh8Q7TSK3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh8Q7TSK3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh8Q7TSK3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh8Q7TSK3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdh8Q7TSK3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh8Q7TSK3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh8Q7TSK3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh8Q7TSK3 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.58■□□□□ 0.72
Pcdh8Q7TSK3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh8Q7TSK3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh8Q7TSK3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh8Q7TSK3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh8Q7TSK3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh8Q7TSK3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.58■□□□□ 0.72
Pcdh8Q7TSK3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Gm5874-201ENSMUST00000096101 508 ntBASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh8Q7TSK3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh8Q7TSK3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms